Nbi_g05342


Description : regulatory protein *(SHOU4) involved in cellulose synthase trafficking & original description: none


Gene families : OG0007231 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0007231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05342

Target Alias Description ECC score Gene Family Method Actions
Adi_g014699 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 39 species
Ala_g14842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 39 species
Als_g01771 No alias regulatory protein *(SHOU4) involved in cellulose... 0.07 OrthoFinder output from all 39 species
Als_g04051 No alias not classified & original description: none 0.06 OrthoFinder output from all 39 species
Aop_g14554 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 39 species
Aspi01Gene69101.t1 Aspi01Gene69101 regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 39 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 39 species
Dac_g08975 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 39 species
Dde_g01576 No alias regulatory protein *(SHOU4) involved in cellulose... 0.01 OrthoFinder output from all 39 species
Len_g04751 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 39 species
Pir_g11301 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 39 species
Ppi_g40377 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 39 species
Spa_g18005 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 39 species
Spa_g18006 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 39 species
Tin_g25164 No alias regulatory protein *(SHOU4) involved in cellulose... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!