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Nbi_g05115


Description : core component *(NHP2) of H/ACA snoRNP RNA pseudouridylation complex & original description: none


Gene families : OG0004004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00261410 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Ceric.32G020300.1 Ceric.32G020300 core component *(NHP2) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species
Spa_g07207 No alias core component *(NHP2) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 36 122
No external refs found!