Aliases : ATATG2, ATG2
Description : component *(ATG2) of autophagosome ATG9-2-18 membrane shuttling complex & original description: none
Gene families : OG0003168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003168_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Nbi_g05017 | |
Cluster | HCCA: Cluster_169 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00126p00106330 | ATATG2, ATG2,... | Vesicle trafficking.autophagosome formation.ATG9-2-18... | 0.03 | OrthoFinder output from all 47 species | |
AT3G19190 | ATATG2, ATG2 | autophagy 2 | 0.04 | OrthoFinder output from all 47 species | |
Ala_g05089 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.05 | OrthoFinder output from all 47 species | |
Als_g59577 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g18064 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01031759001 | ATATG2, ATG2 | Vesicle trafficking.autophagosome formation.ATG9-2-18... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g15700.1 | ATATG2, ATG2,... | component ATG2 of autophagosome ATG9-2-18 membrane... | 0.02 | OrthoFinder output from all 47 species | |
Len_g21121 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g07446 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
MA_10433793g0030 | ATATG2, ATG2 | component ATG2 of autophagosome ATG9-2-18 membrane... | 0.05 | OrthoFinder output from all 47 species | |
MA_131602g0010 | ATATG2, ATG2 | component ATG2 of autophagosome ATG9-2-18 membrane... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g20277 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g08254 | ATATG2, ATG2 | component *(ATG2) of autophagosome ATG9-2-18 membrane... | 0.05 | OrthoFinder output from all 47 species | |
Smo113891 | ATATG2, ATG2 | Vesicle trafficking.autophagosome formation.ATG9-2-18... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
No external refs found! |