Nbi_g04995


Description : not classified & original description: none


Gene families : OG0004653 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04995
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00113p00130190 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g18226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26253.t1 Aspi01Gene26253 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G047800.1 Ceric.03G047800 not classified & original description: pacid=50571645... 0.04 OrthoFinder output from all 47 species
Dcu_g05830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019675001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os04g14510.2 LOC_Os04g14510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g46348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g06020.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g13812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022379 No alias not classified & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Sam_g11226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g083290.4.1 Solyc08g083290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e008509_P002 Zm00001e008509 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!