MA_38893g0010


Description : Transportin-1 OS=Oryza sativa subsp. indica (sp|b8arw2|tnpo1_orysi : 327.0)


Gene families : OG_01_0004680 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004680_tree ,
OG_02_0004644 (LandPlants) Phylogenetic Tree(s): OG_02_0004644_tree ,
OG_03_0006602 (SeedPlants) Phylogenetic Tree(s): OG_03_0006602_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_38893g0010
Cluster HCCA: Cluster_479

Target Alias Description ECC score Gene Family Method Actions
AT2G16950 ATTRN1, TRN1 transportin 1 0.07 Archaeplastida
Cre12.g520550 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 Archaeplastida
GSVIVT01023974001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.1 Archaeplastida
Gb_11406 No alias IMB2 nucleocytoplasmic import karyopherin 0.06 Archaeplastida
Mp7g05740.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.05 Archaeplastida
Pp3c16_4650V3.1 No alias transportin 1 0.05 Archaeplastida
Pp3c27_5090V3.1 No alias transportin 1 0.05 Archaeplastida
Pp3c6_18200V3.1 No alias transportin 1 0.05 Archaeplastida
Smo175519 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Solyc01g111780.4.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.09 Archaeplastida
Zm00001e007506_P002 No alias IMB2 nucleocytoplasmic import karyopherin 0.07 Archaeplastida
Zm00001e042007_P001 No alias IMB2 nucleocytoplasmic import karyopherin 0.04 Archaeplastida
AT2G16950 ATTRN1, TRN1 transportin 1 0.03 LandPlants
GSVIVT01023974001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.06 LandPlants
Gb_11406 No alias IMB2 nucleocytoplasmic import karyopherin 0.04 LandPlants
Mp7g05740.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.03 LandPlants
Pp3c16_4650V3.1 No alias transportin 1 0.02 LandPlants
Pp3c27_5090V3.1 No alias transportin 1 0.02 LandPlants
Pp3c6_18200V3.1 No alias transportin 1 0.03 LandPlants
Smo175519 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 LandPlants
Solyc01g111780.4.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.05 LandPlants
Zm00001e007506_P002 No alias IMB2 nucleocytoplasmic import karyopherin 0.07 LandPlants
Zm00001e042007_P001 No alias IMB2 nucleocytoplasmic import karyopherin 0.02 LandPlants
AT2G16950 ATTRN1, TRN1 transportin 1 0.03 SeedPlants
GSVIVT01023974001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.06 SeedPlants
Gb_11406 No alias IMB2 nucleocytoplasmic import karyopherin 0.04 SeedPlants
Solyc01g111780.4.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.03 SeedPlants
Zm00001e007506_P002 No alias IMB2 nucleocytoplasmic import karyopherin 0.05 SeedPlants
Zm00001e042007_P001 No alias IMB2 nucleocytoplasmic import karyopherin 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001494 Importin-beta_N 34 100
No external refs found!