Nbi_g04810 (CH42, CHLI1, CH-42,...)

Aliases : CH42, CHLI1, CH-42, CHL11, CHLI-1

Description : EC_6.6 ligase forming nitrogen-metal bond & original description: none

Gene families : OG0004301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g04810

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00167540	CH42, CHLI1,...	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.04	OrthoFinder output from all 47 species
Aop_g10481	CHL I2, CHLI2, CHLI-2	EC_6.6 ligase forming nitrogen-metal bond & original...	0.04	OrthoFinder output from all 47 species
Ceric.05G027500.1	CH42, CHLI1,...	EC_6.6 ligase forming nitrogen-metal bond & original...	0.02	OrthoFinder output from all 47 species
Ehy_g04604	CH42, CHLI1,...	EC_6.6 ligase forming nitrogen-metal bond & original...	0.03	OrthoFinder output from all 47 species
Len_g10550	CHL I2, CHLI2, CHLI-2	EC_6.6 ligase forming nitrogen-metal bond & original...	0.02	OrthoFinder output from all 47 species
Lfl_g06951	CH42, CHLI1,...	EC_6.6 ligase forming nitrogen-metal bond & original...	0.02	OrthoFinder output from all 47 species
Mp2g21150.1	CHL I2, CHLI2, CHLI-2	component CHL-I of magnesium-chelatase complex	0.02	OrthoFinder output from all 47 species
Msp_g07868	CHL I2, CHLI2, CHLI-2	EC_6.6 ligase forming nitrogen-metal bond & original...	0.02	OrthoFinder output from all 47 species
Pir_g66743	CHL I2, CHLI2, CHLI-2	EC_6.6 ligase forming nitrogen-metal bond & original...	0.02	OrthoFinder output from all 47 species
Zm00001e039463_P003	CHL I2, CHLI2,...	component CHL-I of magnesium-chelatase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000523	Mg_chelatse_chII-like_cat_dom	199	269
IPR041628	ChlI/MoxR_AAA_lid	350	406

External Links

No external refs found!