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  5. Nbi_g04739

Nbi_g04739


Description : GTPase effector *(RIC) & original description: none


Gene families : OG0003333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04739
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00100470 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AT1G03982 No alias PAK-box/P21-Rho-binding family protein 0.02 OrthoFinder output from all 47 species
AT1G04450 RIC3 ROP-interactive CRIB motif-containing protein 3 0.02 OrthoFinder output from all 47 species
AT2G20430 RIC6 ROP-interactive CRIB motif-containing protein 6 0.03 OrthoFinder output from all 47 species
AT2G33460 RIC1 ROP-interactive CRIB motif-containing protein 1 0.03 OrthoFinder output from all 47 species
AT4G28556 RIC7 PAK-box/P21-Rho-binding family protein 0.03 OrthoFinder output from all 47 species
Aop_g08010 No alias GTPase effector *(RIC) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11754 RIC7 GTPase effector *(RIC) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G020900.1 RIC7, Ceric.07G020900 GTPase effector *(RIC) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g13669 No alias GTPase effector *(RIC) & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os02g56580.1 RIC5, LOC_Os02g56580 GTPase effector (RIC) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53580.1 RIC10, LOC_Os04g53580 GTPase effector (RIC) 0.02 OrthoFinder output from all 47 species
LOC_Os07g26480.2 RIC7, LOC_Os07g26480 GTPase effector (RIC) 0.04 OrthoFinder output from all 47 species
Len_g16360 No alias GTPase effector *(RIC) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26563 RIC7 GTPase effector *(RIC) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05207 RIC7 GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52634 No alias GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g031770.3.1 Solyc03g031770 GTPase effector (RIC) 0.03 OrthoFinder output from all 47 species
Solyc06g083800.4.1 RIC6, Solyc06g083800 GTPase effector (RIC) 0.03 OrthoFinder output from all 47 species
Tin_g06523 No alias GTPase effector *(RIC) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 217 238
No external refs found!