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  5. Nbi_g04703

Nbi_g04703 (RPN10, MCB1, ATMCB1, MBP1)


Aliases : RPN10, MCB1, ATMCB1, MBP1

Description : regulatory component *(RPN10) of 26S proteasome & original description: none


Gene families : OG0003945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04703
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT4G38630 RPN10, MCB1, ATMCB1, MBP1 regulatory particle non-ATPase 10 0.07 OrthoFinder output from all 47 species
Aop_g00617 RPN10, MCB1, ATMCB1, MBP1 regulatory component *(RPN10) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.9 RPN10, MCB1, ATMCB1, MBP1 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Cre16.g663500 RPN10, MCB1, ATMCB1, MBP1 Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
Dcu_g03823 RPN10, MCB1, ATMCB1, MBP1 regulatory component *(RPN10) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Gb_32025 RPN10, MCB1, ATMCB1, MBP1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_32026 RPN10, MCB1, ATMCB1, MBP1 regulatory component RPN10 of 26S proteasome 0.02 OrthoFinder output from all 47 species
LOC_Os03g13970.1 RPN10, MCB1,... regulatory component RPN10 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Lfl_g02845 RPN10, MCB1, ATMCB1, MBP1 regulatory component *(RPN10) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp5g18070.1 RPN10, MCB1, ATMCB1, MBP1 regulatory component RPN10 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Msp_g01084 RPN10, MCB1, ATMCB1, MBP1 regulatory component *(RPN10) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Pp3c6_20680V3.1 RPN10, MCB1,... regulatory particle non-ATPase 10 0.02 OrthoFinder output from all 47 species
Smo170931 RPN10, MCB1, ATMCB1, MBP1 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
Tin_g15557 RPN10, MCB1, ATMCB1, MBP1 regulatory component *(RPN10) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Zm00001e001011_P001 RPN10, MCB1,... regulatory component RPN10 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Zm00001e038598_P003 RPN10, MCB1,... regulatory component RPN10 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 6 115
IPR003903 UIM_dom 332 346
IPR003903 UIM_dom 230 243
IPR003903 UIM_dom 296 311
No external refs found!