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  5. Nbi_g04687

Nbi_g04687


Description : not classified & original description: none


Gene families : OG0005855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04687

Target Alias Description ECC score Gene Family Method Actions
Adi_g059728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G078700.1 Ceric.01G078700 not classified & original description: pacid=50590639... 0.04 OrthoFinder output from all 47 species
Ceric.12G093400.1 Ceric.12G093400 not classified & original description: pacid=50601738... 0.02 OrthoFinder output from all 47 species
Dcu_g06894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034380001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_04968 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g39134.1 LOC_Os01g39134 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g12880.2 LOC_Os02g12880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100327g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g03943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo93701 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g150120.1.1 Solyc02g150120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g17209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00846 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e014460_P003 Zm00001e014460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 303 365
IPR002048 EF_hand_dom 177 190
No external refs found!