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Description : not classified & original description: none
Gene families : OG0002172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002172_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g04626 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g018682 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018683 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01587 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025627 | No alias | not classified & original description: CDS=66-695 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0072.g037062 | No alias | not classified & original description: CDS=211-996 | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.29G019200.1 | Ceric.29G019200 | not classified & original description: pacid=50625656... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13576 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g07507 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09195 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52417 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11992 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g11993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00288 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019769_P001 | Zm00001e019769 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0004470 | malic enzyme activity | IEP | HCCA |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | HCCA |
| MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070037 | rRNA (pseudouridine) methyltransferase activity | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| No external refs found! |