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  5. Nbi_g04594

Nbi_g04594 (RAB2A, AT-RAB2,...)


Aliases : RAB2A, AT-RAB2, RAB-B1B, ATRAB-B1B, RABB1C, ATRABB1C, ATRAB2A

Description : B-class RAB GTPase & original description: none


Gene families : OG0001412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04594

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00136710 RAB2A, AT-RAB2,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
AT4G17170 RAB2A, AT-RAB2,... RAB GTPase homolog B1C 0.03 OrthoFinder output from all 47 species
Aev_g25685 RAB2A, AT-RAB2,... B-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001001.25 RAB2A, AT-RAB2,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
GSVIVT01002785001 RAB2A, AT-RAB2,... Ras-related protein RABB1c OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Msp_g33803 RAB2A, AT-RAB2,... B-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007846_P001 RAB2A, AT-RAB2,... B-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e041052_P001 RAB2A, AT-RAB2,... B-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 168
No external refs found!