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Aliases : LSH6
Description : plant-specific ALOG-type transcription factor & original description: none
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g06922 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04816 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17249 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12712.t1 | LSH4, Aspi01Gene12712 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene25077.t1 | LSH4, Aspi01Gene25077 | plant-specific ALOG-type transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene29667.t1 | LSH4, Aspi01Gene29667 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32958.t1 | LSH4, Aspi01Gene32958 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene46302.t1 | LSH4, Aspi01Gene46302 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene66763.t1 | LSH4, Aspi01Gene66763 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g31587 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G086500.1 | LSH4, Ceric.02G086500 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G090800.1 | LSH6, Ceric.14G090800 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G071900.1 | LSH6, Ceric.22G071900 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g03257 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15328 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22007 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01021215001 | LSH10 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g61310.1 | LSH6, LOC_Os01g61310 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g03807 | LSH1 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g17976 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g00330.1 | LSH4 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g10175 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20213 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32132 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000386 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023275 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo36560 | No alias | Protein G1-like4 OS=Oryza sativa subsp. indica | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g007310.1.1 | LSH10, Solyc10g007310 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06794 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09211 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e012687_P001 | LSH4, Zm00001e012687 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019403_P001 | LSH6, Zm00001e019403 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0004864 | protein phosphatase inhibitor activity | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019212 | phosphatase inhibitor activity | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006936 | ALOG_dom | 167 | 287 |
| No external refs found! |