GSVIVT01033360001


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases ADPG2. polygalacturonase abscission zone A. thaliana (PGAZAT)


Gene families : OG_01_0000383 (Gene family) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01033360001
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.01 Gene family
AT5G39910 No alias Pectin lyase-like superfamily protein 0.02 Gene family
GSVIVT01017302001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 107 431
No external refs found!