Nbi_g04312 (ATGCN1, GCN1)

Aliases : ATGCN1, GCN1

Description : not classified & original description: none

Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g04312
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
Adi_g000508	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g40172	ATGCN1, GCN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01343	ATGCN1, GCN1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000383.51	ATGCN1, GCN1	ABC transporter F family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g09935	ATGCN1, GCN1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g03912	ATGCN1, GCN1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g19737	ATGCN1, GCN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01954	ATGCN1, GCN1	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g22362	ATGCN1, GCN1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g31878	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g18687	ATGCN1, GCN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g07883	ATGCN1, GCN1	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032781	ABC_tran_Xtn	284	360
IPR003439	ABC_transporter-like_ATP-bd	90	245
IPR003439	ABC_transporter-like_ATP-bd	401	531

External Links

No external refs found!