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  5. Nbi_g04274

Nbi_g04274


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04274

Target Alias Description ECC score Gene Family Method Actions
Adi_g102382 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29176.t1 Aspi01Gene29176 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g08160.1 LOC_Os01g08160 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g03168 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g25323 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g43039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005748 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g29341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37435 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 264 315
No external refs found!