Nbi_g04229 (ATSYP124, SYP124)


Aliases : ATSYP124, SYP124

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00050990 SYP121,... Vesicle trafficking.SNARE target membrane recognition... 0.05 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.06 OrthoFinder output from all 47 species
AT3G11820 SYP121,... syntaxin of plants 121 0.05 OrthoFinder output from all 47 species
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.05 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.02 OrthoFinder output from all 47 species
Adi_g081976 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aev_g00913 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ala_g08621 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Als_g02333 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Als_g34924 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g36578 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aob_g01068 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aob_g02813 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aop_g07416 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aop_g20584 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00477.t1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03950.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15933.t1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72617.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0220.g058684 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cba_g18287 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Ceric.09G096900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.11G031700.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.22G024200.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dac_g03186 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dcu_g04463 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dcu_g19765 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Dde_g04282 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Dde_g18785 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dde_g43398 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g02362 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ehy_g12752 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01030578001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Gb_16444 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
LOC_Os02g11890.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.06 OrthoFinder output from all 47 species
Len_g18253 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
MA_28961g0010 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Mp2g19600.1 SYP132, ATSYP132 SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Mp4g20670.1 SYP123, ATSYP123 SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Ore_g01296 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g09931 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g17925 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Ore_g26913 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pir_g04642 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pir_g11139 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ppi_g01001 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012994 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sam_g11699 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g36661 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Smo443146 SYP132, ATSYP132 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Smo74098 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Solyc01g006950.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Solyc10g081850.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Tin_g31514 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Zm00001e005922_P001 SYP121,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 253 305
IPR006011 Syntaxin_N 49 252
No external refs found!