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  5. Nbi_g04171

Nbi_g04171


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04171
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT1G63470 No alias AT hook motif DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G61310 No alias AT hook motif DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT4G22770 No alias AT hook motif DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Aob_g14829 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19881 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25460 No alias AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g57820.1 LOC_Os02g57820 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os10g42230.2 LOC_Os10g42230 AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species
Solyc01g094460.3.1 Solyc01g094460 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc08g008030.3.1 Solyc08g008030 AT-hook motif nuclear-localized protein 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g080960.4.1 Solyc08g080960 AT-hook motif nuclear-localized protein 5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g13305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41096 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51304 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023546_P003 Zm00001e023546 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e041401_P002 Zm00001e041401 AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 177 290
No external refs found!