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Nbi_g04135


Description : substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00078790 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g075003 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ala_g12660 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g14964 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aob_g01966 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g05892 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g01117 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01021526001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_31373g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species
Pir_g19771 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g19717 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 9 44
No external refs found!