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  5. Nbi_g04116

Nbi_g04116 (ATCSP2, GRP2, CSDP2, CSP2)


Aliases : ATCSP2, GRP2, CSDP2, CSP2

Description : not classified & original description: none


Gene families : OG0008764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04116

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0036.g025822 No alias not classified & original description: CDS=13-714 0.04 OrthoFinder output from all 47 species
Cba_g18023 EIF4B2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24626 EIF4B1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015850 organic hydroxy compound transport IEP HCCA
BP GO:0015918 sterol transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032366 intracellular sterol transport IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR010433 EIF-4B_pln 10 53
IPR001878 Znf_CCHC 189 205
IPR001878 Znf_CCHC 243 260
No external refs found!