Nbi_g04085 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : non-photochemical quenching PsbS protein & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04085
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00154940 NPQ4, PSBS,... Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
AT1G44575 NPQ4, PSBS Chlorophyll A-B binding family protein 0.05 OrthoFinder output from all 47 species
Adi_g083731 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.08 OrthoFinder output from all 47 species
Adi_g083732 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Adi_g083733 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Aev_g49065 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ala_g13911 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Als_g10582 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Aob_g38592 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52546.t1 NPQ4, PSBS,... non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000408 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0314.g064232 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s1943.g108312 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Cba_g01831 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.08 OrthoFinder output from all 47 species
Ceric.36G021200.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Cre01.g016750 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g26756 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Dde_g06083 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06548 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01008866001 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
Gb_30734 NPQ4, PSBS non-photochemical quenching PsbS protein 0.04 OrthoFinder output from all 47 species
LOC_Os01g64960.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.05 OrthoFinder output from all 47 species
Len_g07934 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Lfl_g30875 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Mp8g05910.1 NPQ4, PSBS non-photochemical quenching PsbS protein 0.02 OrthoFinder output from all 47 species
Ore_g05767 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.09 OrthoFinder output from all 47 species
Ore_g31160 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Ore_g32353 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Pir_g51143 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Pnu_g07004 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.1 OrthoFinder output from all 47 species
Pnu_g19930 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Ppi_g48261 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022187 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Sam_g11981 No alias non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Spa_g17275 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Tin_g11495 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.1 OrthoFinder output from all 47 species
Zm00001e019137_P001 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 86 214
No external refs found!