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  5. Nbi_g04083

Nbi_g04083 (UBC5)


Aliases : UBC5

Description : E2 ubiquitin-conjugating enzyme *(UBC4) & original description: none


Gene families : OG0002481 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04083
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G027100.1 UBC5, Ceric.04G027100 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0069.g016567 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.01 OrthoFinder output from all 39 species
Spa_g09673 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.01 OrthoFinder output from all 39 species
Zm00001e000387_P004 UBC4, ATUBC4,... ubiquitin-conjugating E2 protein 0.01 OrthoFinder output from all 39 species
Zm00001e038978_P001 UBC4, ATUBC4,... ubiquitin-conjugating E2 protein 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 11 142
No external refs found!