GSVIVT01032935001


Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A25 (EXPA25)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01032935001
Cluster HCCA cluster: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT5G39300 ATEXPA25,... expansin A25 0.02 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_86877g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc03g115270.2.1 Solyc03g115270.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc03g115890.3.1 Solyc03g115890.3 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc06g005560.3.1 Solyc06g005560.3 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc09g010860.3.1 Solyc09g010860.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 261 338
IPR009009 RlpA-like_DPBB 165 250
No external refs found!