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  5. Nbi_g03862

Nbi_g03862 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000928 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03862
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Ala_g15212 PGP13 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 39 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 39 species
Aop_g32929 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 39 species
Azfi_s0232.g059284 PGP13 subfamily ABCB transporter & original description: CDS=307-4314 0.02 OrthoFinder output from all 39 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g06939 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g10485 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Dde_g08514 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Len_g14182 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g08040 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g03284 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 39 species
Sam_g04479 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g08541 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 39 species
Tin_g29489 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 100 372
IPR011527 ABC1_TM_dom 749 1017
IPR003439 ABC_transporter-like_ATP-bd 443 591
IPR003439 ABC_transporter-like_ATP-bd 1086 1234
No external refs found!