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  5. Nbi_g03847

Nbi_g03847


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03847
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Aev_g14846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G007900.1 Ceric.33G007900 not classified & original description: pacid=50607060... 0.05 OrthoFinder output from all 47 species
Dac_g12357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020014001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Len_g02424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 1042 1095
IPR027988 BRX_N 904 935
IPR000408 Reg_chr_condens 379 428
IPR000408 Reg_chr_condens 548 597
IPR000408 Reg_chr_condens 433 481
IPR000408 Reg_chr_condens 496 545
IPR000408 Reg_chr_condens 328 376
IPR000408 Reg_chr_condens 602 649
IPR000306 Znf_FYVE 653 719
No external refs found!