Nbi_g03840

Description : CORVET-specific component *(VPS3) of HOPS/CORVET membrane tethering complexes & original description: none

Gene families : OG0005975 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0005975_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g03840

Target	Alias	Description	ECC score	Gene Family Method
Als_g23233	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.05	OrthoFinder output from all 39 species
Aspi01Gene42560.t1	Aspi01Gene42560	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.01	OrthoFinder output from all 39 species
Aspi01Gene42562.t1	Aspi01Gene42562	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Ceric.1Z286500.1	Ceric.1Z286500	not classified & original description: pacid=50637237...	0.03	OrthoFinder output from all 39 species
Len_g08857	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.01	OrthoFinder output from all 39 species
Lfl_g10679	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 39 species
Msp_g14567	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 39 species
Sacu_v1.1_s0075.g017384	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.01	OrthoFinder output from all 39 species
Sam_g16295	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.01	OrthoFinder output from all 39 species
Spa_g12642	No alias	CORVET-specific component *(VPS3) of HOPS/CORVET...	0.02	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001180	CNH_dom	256	441
IPR019453	VPS39/TGF_beta_rcpt-assoc_2	955	1062
IPR019452	VPS39/TGF_beta_rcpt-assoc_1	650	725
IPR000547	Clathrin_H-chain/VPS_repeat	808	941

External Links

No external refs found!