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  5. MA_3634858g0010

MA_3634858g0010


Description : UBP1-associated protein 2C OS=Arabidopsis thaliana (sp|q9lka4|uba2c_arath : 96.7)


Gene families : OG_01_0000953 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000953_tree ,
OG_02_0000628 (LandPlants) Phylogenetic Tree(s): OG_02_0000628_tree ,
OG_03_0000928 (SeedPlants) Phylogenetic Tree(s): OG_03_0000928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3634858g0010
Cluster HCCA: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00228130 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00101p00033020 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G15010 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
AT3G56860 UBA2A UBP1-associated protein 2A 0.03 Archaeplastida
GSVIVT01022197001 No alias UBP1-associated protein 2B OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01037491001 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01713 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_04917 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g16090.1 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g42820.3 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g22090.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g08960.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g008970.4.1 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g021560.4.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc10g081330.3.1 No alias UBP1-associated protein 2B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g014210.3.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e020692_P003 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e027861_P001 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 Archaeplastida
AMTR_s00010p00228130 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.03 LandPlants
AMTR_s00101p00033020 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.04 LandPlants
AT3G15010 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
AT3G56860 UBA2A UBP1-associated protein 2A 0.03 LandPlants
GSVIVT01022197001 No alias UBP1-associated protein 2B OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01037491001 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana 0.03 LandPlants
Gb_04917 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.04 LandPlants
LOC_Os01g16090.1 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os01g42820.3 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 LandPlants
Mp2g22090.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc01g008970.4.1 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc02g021560.4.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.07 LandPlants
Solyc12g014210.3.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e020692_P003 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 LandPlants
AMTR_s00010p00228130 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.02 SeedPlants
AMTR_s00101p00033020 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.04 SeedPlants
AT3G15010 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 SeedPlants
AT3G56860 UBA2A UBP1-associated protein 2A 0.03 SeedPlants
GSVIVT01022197001 No alias UBP1-associated protein 2B OS=Arabidopsis thaliana 0.02 SeedPlants
GSVIVT01037491001 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana 0.03 SeedPlants
Gb_04917 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 SeedPlants
LOC_Os01g16090.1 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.02 SeedPlants
LOC_Os01g42820.3 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 SeedPlants
Solyc01g008970.4.1 No alias UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.05 SeedPlants
Solyc02g021560.4.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.06 SeedPlants
Solyc12g014210.3.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 SeedPlants
Zm00001e020692_P003 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 2 36
No external refs found!