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  5. Nbi_g03782

Nbi_g03782


Description : not classified & original description: none


Gene families : OG0042101 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0042101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03782

Target Alias Description ECC score Gene Family Method Actions
Dde_g31679 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Msp_g47208 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 771 827
IPR002885 Pentatricopeptide_repeat 224 246
IPR002885 Pentatricopeptide_repeat 528 550
IPR002885 Pentatricopeptide_repeat 325 352
IPR002885 Pentatricopeptide_repeat 353 383
IPR002885 Pentatricopeptide_repeat 553 601
IPR002885 Pentatricopeptide_repeat 149 196
IPR002885 Pentatricopeptide_repeat 451 499
IPR002885 Pentatricopeptide_repeat 653 700
IPR002885 Pentatricopeptide_repeat 250 295
No external refs found!