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  5. Nbi_g03750

Nbi_g03750 (VAD1)


Aliases : VAD1

Description : not classified & original description: none


Gene families : OG0003607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03750

Target Alias Description ECC score Gene Family Method Actions
Pnu_g06533 VAD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo422979 VAD1 Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g26543 VAD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010401_P001 VAD1, Zm00001e010401 Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 78 182
IPR031968 VASt 301 449
No external refs found!