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  5. Nbi_g03608

Nbi_g03608


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03608
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00095700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.03 OrthoFinder output from all 47 species
Ceric.35G024600.1 Ceric.35G024600 not classified & original description: pacid=50580868... 0.03 OrthoFinder output from all 47 species
Dac_g26800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g55260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g094130.3.1 Solyc02g094130 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 268.0) 0.03 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.02 OrthoFinder output from all 47 species
Solyc09g074380.4.1 Solyc09g074380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04772 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g05292 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g06353 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g06576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03367 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g08253 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 118 242
No external refs found!