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  5. Nbi_g03588

Nbi_g03588 (SMT2, FRL1, CVP1)


Aliases : SMT2, FRL1, CVP1

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03588

Target Alias Description ECC score Gene Family Method Actions
Adi_g088519 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g05127 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g68433 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dcu_g15834 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g21808 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pnu_g04476 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008662 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Spa_g16955 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Tin_g05980 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013705 Sterol_MeTrfase_C 302 365
IPR013216 Methyltransf_11 138 233
No external refs found!