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  5. Nbi_g03573

Nbi_g03573 (AXS1)


Aliases : AXS1

Description : UDP-D-apiose / UPD-D-xylose synthetase & original description: none


Gene families : OG0001180 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03573

Target Alias Description ECC score Gene Family Method Actions
Als_g57112 AXS1 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.02 OrthoFinder output from all 39 species
Dac_g15928 AXS2 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.02 OrthoFinder output from all 39 species
Msp_g46392 AXS2 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.01 OrthoFinder output from all 39 species
Pir_g12847 AXS1 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.01 OrthoFinder output from all 39 species
Pir_g50066 AXS1 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0045.g013212 AXS2 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.01 OrthoFinder output from all 39 species
Sam_g11163 No alias UDP-D-apiose / UPD-D-xylose synthetase & original... 0.01 OrthoFinder output from all 39 species
Spa_g17707 AXS1 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.01 OrthoFinder output from all 39 species
Spa_g29203 AXS2 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.02 OrthoFinder output from all 39 species
Spa_g37243 AXS2 UDP-D-apiose / UPD-D-xylose synthetase & original... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 19 288
No external refs found!