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  5. Nbi_g03561

Nbi_g03561 (SYP32, ATSYP32)


Aliases : SYP32, ATSYP32

Description : Qa-type SYP3-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03561

Target Alias Description ECC score Gene Family Method Actions
AT5G05760 ATSED5, SED5,... syntaxin of plants 31 0.02 OrthoFinder output from all 47 species
Adi_g082700 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g03019 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000073.39 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
LOC_Os01g08400.1 SYP32, ATSYP32,... SYP3-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Tin_g04614 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Zm00001e025913_P001 SYP32, ATSYP32,... SYP3-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
InterPro domains Description Start Stop
IPR021538 Syntaxin-5_N 1 23
IPR000727 T_SNARE_dom 294 344
No external refs found!