GSVIVT01032251001


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor that


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01032251001
Cluster HCCA cluster: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G59750 ARF1 auxin response factor 1 0.03 Gene family
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.04 Gene family
AT5G62000 HSS, ARF1-BP, ARF2, ORE14 auxin response factor 2 0.04 Gene family
LOC_Os02g06910 Os02g0164900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os06g46410 Os06g0677800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_10432580g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_67394g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_85955g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d011953 GRMZM2G116557 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014377 GRMZM2G035405 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d014690 GRMZM2G317900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d015243 GRMZM2G102845 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d023659 GRMZM2G006042 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d042267 GRMZM2G338259 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d051172 GRMZM2G081406 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 133 234
IPR033389 AUX/IAA_dom 921 1007
IPR010525 Auxin_resp 259 342
No external refs found!