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  5. Nbi_g03462

Nbi_g03462


Description : LSU processome maturation factor *(NSA2) & original description: none


Gene families : OG0003771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03462
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Als_g14417 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G100700.1 Ceric.07G100700 LSU processome maturation factor *(NSA2) & original... 0.05 OrthoFinder output from all 47 species
Cre12.g507300 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
LOC_Os07g47580.1 LOC_Os07g47580 NSA2 LSU processome maturation factor 0.04 OrthoFinder output from all 47 species
Lfl_g20840 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g37110 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
MA_11189g0010 No alias NSA2 LSU processome maturation factor 0.03 OrthoFinder output from all 47 species
Mp4g23600.1 No alias NSA2 LSU processome maturation factor 0.04 OrthoFinder output from all 47 species
Ppi_g32826 No alias LSU processome maturation factor *(NSA2) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g32827 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g00911 No alias LSU processome maturation factor *(NSA2) & original... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 35 259
No external refs found!