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  5. Nbi_g03195

Nbi_g03195


Description : component *(NFRKB1) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0001406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03195

Target Alias Description ECC score Gene Family Method Actions
Adi_g016710 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Adi_g080594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18222 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g09635 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Dac_g13605 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Len_g02429 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Lfl_g05016 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ppi_g03270 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g29794 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Zm00001e027598_P001 Zm00001e027598 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029533_P001 Zm00001e029533 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!