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Nbi_g03185 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : starch synthase *(SS4) & original description: none


Gene families : OG0005688 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0005688_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g03185
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Adi_g058565 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.01 OrthoFinder output from all 39 species
Aspi01Gene43819.t1 Aspi01Gene43819 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Aspi01Gene43820.t1 ATSS4, SS4,... starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 39 species
Dde_g14950 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g26044 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 841 996
IPR013534 Starch_synth_cat_dom 546 785
No external refs found!