Nbi_g03168 (CHR24)

Aliases : CHR24

Description : chromatin remodeling factor *(ERCC6) & original description: none

Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g03168
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
Ala_g14754	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13293	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0558.g076902	CHR24	chromatin remodeling factor *(ERCC6) & original...	0.03	OrthoFinder output from all 47 species
Cre03.g183350	CHR24	Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os04g59620.1	CHR24, LOC_Os04g59620	chromatin remodeling factor (ERCC6)	0.02	OrthoFinder output from all 47 species
LOC_Os04g59624.2	CHR24, LOC_Os04g59624	chromatin remodeling factor (ERCC6)	0.04	OrthoFinder output from all 47 species
Lfl_g19269	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
MA_18372g0010	CHR24	Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Mp1g29760.1	CHR24	chromatin remodeling factor (ERCC6)	0.04	OrthoFinder output from all 47 species
Msp_g36236	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g01364	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g068280.3.1	CHR24, Solyc01g068280	chromatin remodeling factor (ERCC6)	0.04	OrthoFinder output from all 47 species
Spa_g24729	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g19329	CHR24	chromaTin remodeling factor *(ERCC6) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	272	564
IPR001650	Helicase_C	616	728

External Links

No external refs found!

Nbi_g03168 (CHR24)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation