Aliases : CHR17
Description : ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes & original description: none
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g18221 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g18378 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g20304 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g25745 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0129.g048917 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g23143 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000350.9 | PKR2 | CHD3-type chromatin-remodeling factor PICKLE... | 0.01 | OrthoFinder output from all 47 species | |
Cre03.g158550 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.01 | OrthoFinder output from all 47 species | |
Cre16.g647602 | CHR01, CHR1,... | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g18387 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g12901 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g25685 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g36640 | PKL, GYM, CHR6,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo440203 | CHR11 | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g062780.4.1 | CHR01, CHR1,... | chromatin remodeling factor (DDM1) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026331_P001 | CHR17, Zm00001e026331 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |