Nbi_g02981

Description : DNA polymerase lambda *(POLL) & original description: none

Gene families : OG0003218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003218_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g02981

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0004.g008503	No alias	DNA polymerase lambda *(POLL) & original description: CDS=54-1643	0.03	OrthoFinder output from all 47 species
Cre17.g716101	No alias	DNA damage response.DNA repair polymerase activities.DNA...	0.01	OrthoFinder output from all 47 species
Pir_g12147	No alias	DNA polymerase lambda *(POLL) & original description: none	0.03	OrthoFinder output from all 47 species
Smo155063	No alias	DNA damage response.DNA repair polymerase activities.DNA...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029398	PolB_thumb	453	524
IPR018944	DNA_pol_lambd_fingers_domain	281	329
IPR001357	BRCT_dom	21	110
IPR028207	DNA_pol_B_palm_palm	331	445
IPR010996	DNA_pol_b-like_N	195	261

External Links

No external refs found!