GSVIVT01031467001


Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG_01_0001252 (Gene family) Phylogenetic Tree(s): OG0001252_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01031467001
Cluster HCCA cluster: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT5G18650 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.05 Gene family
AT5G22920 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.04 Gene family
GSVIVT01035743001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os03g22680 Os03g0348900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g31850 Os10g0456800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_10429565g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_126866g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc06g084510.3.1 Solyc06g084510.3 No description available 0.02 Gene family
Solyc08g067960.3.1 Solyc08g067960.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d029141 GRMZM2G052034 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039512 RCHY1_zinc-ribbon 212 270
IPR027370 Znf-RING_LisH 165 205
IPR008913 Znf_CHY 29 110
No external refs found!