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  5. GSVIVT01031430001

GSVIVT01031430001


Description : 33.99 development.unspecified ARGONAUTE 5 (AGO5)


Gene families : OG_01_0000084 (Gene family) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01031430001
Cluster HCCA cluster: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.02 Gene family
AT2G27040 AGO4, OCP11 Argonaute family protein 0.02 Gene family
AT2G32940 AGO6 Argonaute family protein 0.02 Gene family
Cpa|evm.model.tig00020961.9 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.01 Gene family
GSVIVT01029383001 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
LOC_Os04g47870 Os04g0566500 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
MA_118377g0010 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
MA_14457g0010 No alias 33.99 development.unspecified AGO9-dependent sRNA... 0.03 Gene family
MA_18547g0010 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
MA_243101g0010 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
Solyc09g082830.3.1 Solyc09g082830.3 29.2.3 protein.synthesis.initiation Encodes a member of... 0.03 Gene family
Zm00001d002650 GRMZM2G039455 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
Zm00001d011096 GRMZM2G162525 33.99 development.unspecified Encodes an RNA Slicer that... 0.03 Gene family
Zm00001d026111 GRMZM2G702579 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family
Zm00001d033206 GRMZM2G457370 29.2.3 protein.synthesis.initiation Encodes a member of... 0.02 Gene family
Zm00001d036917 GRMZM2G079080 29.2.3 protein.synthesis.initiation Encodes a member of... 0.02 Gene family
Zm00001d040429 GRMZM2G048335,... 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.03 Gene family
Zm00001d046438 No alias 29.2.3 protein.synthesis.initiation Encodes a member of... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014811 ArgoL1 329 378
IPR032474 Argonaute_N 184 318
IPR032472 ArgoL2 519 566
IPR003165 Piwi 675 992
IPR003100 PAZ_dom 392 509
IPR032473 Argonaute_Mid_dom 577 655
No external refs found!