GSVIVT01031411001


Description : 27.3.67 RNA.regulation of transcription.putative transcription regulator PHD finger family protein


Gene families : OG_01_0003405 (Gene family) Phylogenetic Tree(s): OG0003405_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01031411001
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT5G12400 No alias DNA binding;zinc ion binding;DNA binding 0.14 Gene family
AT5G35210 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.03 Gene family
LOC_Os07g46690 Os07g0661500,... 27.3.63 RNA.regulation of transcription.PHD finger... 0.03 Gene family
LOC_Os11g05130 Os11g0148700 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
MA_10689g0010 No alias 29.5 protein.degradation metalloendopeptidaseszinc ion... 0.03 Gene family
Solyc11g065160.2.1 Solyc11g065160.2 27.3.63 RNA.regulation of transcription.PHD finger... 0.13 Gene family
Solyc11g066780.2.1 Solyc11g066780.2 27.3.67 RNA.regulation of transcription.putative... 0.09 Gene family
Zm00001d004925 GRMZM2G403562 29.5 protein.degradation metalloendopeptidaseszinc ion... 0.08 Gene family
Zm00001d023391 GRMZM2G314661 29.5 protein.degradation metalloendopeptidaseszinc ion... 0.08 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR028942 WHIM1_dom 123 165
IPR018501 DDT_dom 20 75
IPR019787 Znf_PHD-finger 199 241
No external refs found!