Nbi_g02846


Description : substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin ligase complex & original description: none


Gene families : OG0005462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005462_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02846
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT1G76260 DWA2 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 0.04 OrthoFinder output from all 47 species
Als_g33426 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g06681 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cba_g00852 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001030.28 No alias WD repeat-containing protein DWA2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g03679 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Dcu_g01357 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.08 OrthoFinder output from all 47 species
Ehy_g21943 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01008680001 No alias WD repeat-containing protein DWA2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os08g44010.1 LOC_Os08g44010 WD repeat-containing protein DWA2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Mp4g15950.1 No alias WD repeat-containing protein DWA2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g01063 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Ppi_g33389 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo170180 No alias WD repeat-containing protein DWA2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc04g082300.2.1 Solyc04g082300 WD repeat-containing protein DWA2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g16679 No alias substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin... 0.06 OrthoFinder output from all 47 species
Zm00001e003971_P001 Zm00001e003971 WD repeat-containing protein DWA2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e022533_P003 Zm00001e022533 WD repeat-containing protein DWA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 305 339
No external refs found!