GSVIVT01031311001


Description : 26.12 misc.peroxidases Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. RARE COLD INDUCIBLE GENE 3 (RCI3)


Gene families : OG_01_0000661 (Gene family) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01031311001
Cluster HCCA cluster: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
MA_10433564g0020 No alias 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.02 Gene family
MA_46801g0010 No alias 26.12 misc.peroxidases Peroxidase superfamily protein 0.04 Gene family
MA_87008g0010 No alias 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.05 Gene family
MA_93508g0010 No alias No description available 0.02 Gene family
Smo232359 PACid_15418990 No description available 0.02 Gene family
Smo266691 PACid_15409987 No description available 0.02 Gene family
Zm00001d010925 GRMZM2G043855 26.12 misc.peroxidases Peroxidase superfamily protein 0.05 Gene family
Zm00001d024751 No alias 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.02 Gene family
Zm00001d024753 GRMZM2G177792 20.2.2 stress.abiotic.cold Encodes a cold-inducible... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan
BP GO:0006979 response to oxidative stress IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 32 279
No external refs found!