Nbi_g02747 (ERD2B)


Aliases : ERD2B

Description : COPI trafficking K/HDEL-signature cargo receptor & original description: none


Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02747
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00228p00021360 ERD2B,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Aop_g35378 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.04 OrthoFinder output from all 47 species
Ceric.08G005400.1 ERD2B, Ceric.08G005400 COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Cre01.g051400 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Dac_g01978 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.04 OrthoFinder output from all 47 species
Dcu_g00909 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
LOC_Os11g28340.1 ERD2B, LOC_Os11g28340 ERD2 COPI trafficking K/HDEL-signature receptor 0.02 OrthoFinder output from all 47 species
Msp_g02326 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
Solyc09g091900.4.1 ERD2B, Solyc09g091900 ERD2 COPI trafficking K/HDEL-signature receptor 0.04 OrthoFinder output from all 47 species
Tin_g05413 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!