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  5. Nbi_g02726

Nbi_g02726 (UBC10)


Aliases : UBC10

Description : E2 MUB ubiquitin-conjugating enzyme & original description: none


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02726
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.03 OrthoFinder output from all 47 species
Als_g39881 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50247 UBC13B, UBC36 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60128 UBC13B, UBC36 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28213 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014758001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
MA_13020g0010 UBC10 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Mp3g18170.1 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Solyc08g081945.1.1 UBC10, Solyc08g081945 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Solyc12g056100.3.1 UBC9, Solyc12g056100 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Spa_g01833 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019454_P001 ATUBC11, UBC11,... conjugation E2 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!