Nbi_g02685


Description : not classified & original description: none


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02685
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00118590 evm_27.TU.AmTr_v1... Probable plastid-lipid-associated protein 4,... 0.05 OrthoFinder output from all 47 species
Adi_g041304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g04164 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g00944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0245.g059935 No alias not classified & original description: CDS=43-876 0.03 OrthoFinder output from all 47 species
Ceric.28G040000.1 Ceric.28G040000 not classified & original description: pacid=50570971... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.30 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Cre03.g188650 No alias Probable plastid-lipid-associated protein 4,... 0.01 OrthoFinder output from all 47 species
Dcu_g42345 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g17659 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01022998001 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49720.1 LOC_Os03g49720 Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Len_g48766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435383g0010 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Mp1g00160.1 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
Ore_g01288 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g35789 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g13948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g06190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc11g044530.2.1 Solyc11g044530 Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Zm00001e005397_P001 Zm00001e005397 Probable plastid-lipid-associated protein 4,... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 72 232
No external refs found!