Description : scaffold nucleoporin of nuclear pore complex *(NUP205) & original description: none
Gene families : OG0003848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003848_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g011594 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.36G007000.1 | Ceric.36G007000 | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.03 | OrthoFinder output from all 47 species | |
Cre13.g578100 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dac_g01801 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g12341 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g10790.1 | LOC_Os02g10790 | NUP205 scaffold nucleoporin of nuclear pore complex | 0.02 | OrthoFinder output from all 47 species | |
Pir_g61394 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c20_13260V3.1 | Pp3c20_13260 | Protein of unknown function (DUF3414) | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g08343 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06176 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP205) &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e014006_P001 | Zm00001e014006 | NUP205 scaffold nucleoporin of nuclear pore complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005643 | nuclear pore | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021827 | Nup186/Nup192/Nup205 | 7 | 1639 |
No external refs found! |