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  5. Nbi_g02490

Nbi_g02490 (HOS1)


Aliases : HOS1

Description : scaffold nucleoporin of nuclear pore complex *(ELYS) & original description: none


Gene families : OG0005065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02490

Target Alias Description ECC score Gene Family Method Actions
AT2G39810 HOS1 ubiquitin-protein ligases 0.02 OrthoFinder output from all 47 species
Als_g56636 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.03 OrthoFinder output from all 47 species
Aop_g13573 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.04 OrthoFinder output from all 47 species
Cba_g25679 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.04 OrthoFinder output from all 47 species
Cre16.g683437 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g07754 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.04 OrthoFinder output from all 47 species
MA_573521g0010 HOS1 ELYS scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Ore_g28868 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.03 OrthoFinder output from all 47 species
Pir_g10456 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.05 OrthoFinder output from all 47 species
Sam_g19447 No alias scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.03 OrthoFinder output from all 47 species
Spa_g09103 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.06 OrthoFinder output from all 47 species
Tin_g16985 HOS1 scaffold nucleoporin of nuclear pore complex *(ELYS) &... 0.06 OrthoFinder output from all 47 species
Zm00001e005599_P002 HOS1, Zm00001e005599 ELYS scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR025151 ELYS_dom 370 661
No external refs found!