Nbi_g02415

Description : mTERF-type transcription factor & original description: none

Gene families : OG0003109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003109_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g02415

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00060270	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.03	OrthoFinder output from all 47 species
AT4G02990	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
Adi_g025507	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g18655	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035975	No alias	mTERF-type transcription factor & original description:...	0.07	OrthoFinder output from all 47 species
Cba_g12903	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.13G090900.1	Ceric.13G090900	mTERF-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Dde_g25661	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Gb_36311	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	OrthoFinder output from all 47 species
LOC_Os02g54200.1	LOC_Os02g54200	transcription factor (mTERF). mTERF mitochondrial RNA...	0.04	OrthoFinder output from all 47 species
MA_15876g0010	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.02	OrthoFinder output from all 47 species
Pir_g02844	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g10602	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g09109	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019406	No alias	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Smo92242	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
Solyc04g005630.3.1	Solyc04g005630	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	OrthoFinder output from all 47 species
Spa_g41315	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e027106_P001	Zm00001e027106	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	251	559

External Links

No external refs found!

Nbi_g02415

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation