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  5. Nbi_g02329

Nbi_g02329


Description : regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex & original description: none


Gene families : OG0003183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02329
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT5G08390 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Dcu_g27771 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.06 OrthoFinder output from all 47 species
Ehy_g10011 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.05 OrthoFinder output from all 47 species
LOC_Os04g58130.1 LOC_Os04g58130 regulatory component of Katanin ATP-dependent... 0.06 OrthoFinder output from all 47 species
Msp_g13864 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002424 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g17543 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e006531_P001 Zm00001e006531 regulatory component of Katanin ATP-dependent... 0.09 OrthoFinder output from all 47 species
Zm00001e028950_P004 Zm00001e028950 regulatory component of Katanin ATP-dependent... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR028021 Katanin_C-terminal 637 795
IPR001680 WD40_repeat 7 42
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 50 85
IPR001680 WD40_repeat 173 211
IPR001680 WD40_repeat 133 169
No external refs found!